`list_pathways`

Pack: wikipathways · Connect: https://pipeworx.io/mcp (see Connect below for a single-pack URL)

No MCP client? Call it directly: GET https://gateway.pipeworx.io/v1/tools/list_pathways for the schema, then POST the same URL with its arguments for the data.

List all WikiPathways pathways for a single organism. Give a Latin or common name, e.g. “Homo sapiens”, “human”, or “mouse”. Returns each pathway’s id, name, link, and last revision. Keyless.

Parameters

Name	Type	Required	Description
`organism`	string	yes	Organism by Latin or common name, e.g. “Homo sapiens”, “human”, “mouse”.
`limit`	number	no	Max results (default 50, max 200).

Example call

Arguments

{
  "organism": "Homo sapiens"
}

curl

curl -X POST https://gateway.pipeworx.io/wikipathways/mcp \
  -H 'Content-Type: application/json' \
  -d '{"jsonrpc":"2.0","id":1,"method":"tools/call","params":{"name":"list_pathways","arguments":{"organism":"Homo sapiens"}}}'

TypeScript (@pipeworx/sdk)

import { Pipeworx } from '@pipeworx/sdk';
const pipeworx = new Pipeworx();

const result = await pipeworx.call('list_pathways', {
  "organism": "Homo sapiens"
});

More examples

{
  "organism": "mouse",
  "limit": 50
}

Connect

Add this to your MCP client config — every tool in the catalog, including this one — or use one-click install buttons:

{
  "mcpServers": {
    "pipeworx": {
      "url": "https://pipeworx.io/mcp"
    }
  }
}

Connect to just the wikipathways pack

{
  "mcpServers": {
    "wikipathways": {
      "url": "https://gateway.pipeworx.io/wikipathways/mcp"
    }
  }
}

See Getting Started for client-specific install steps.

list_pathways