get_gene
Pack: pombase · Endpoint: https://gateway.pipeworx.io/pombase/mcp
PomBase (fission yeast / S. pombe model-organism DB): look up a gene by its PomBase systematic id and return its product, protein domains (InterPro), deletion viability, UniProt id, and curation status. Keyless. NOTE: requires a systematic id like “SPAC1002.01” or “SPBC2F12.13” — standard gene names like “cdc2” are NOT resolved by this API. Complements SGD (budding yeast).
Parameters
| Name | Type | Required | Description |
|---|---|---|---|
id | string | yes | A PomBase systematic id, e.g. “SPAC1002.01” or “SPBC2F12.13”. Standard names (“cdc2”) are not accepted. |
Example call
curl -X POST https://gateway.pipeworx.io/pombase/mcp \
-H 'Content-Type: application/json' \
-d '{"jsonrpc":"2.0","id":1,"method":"tools/call","params":{"name":"get_gene","arguments":{}}}'Connect
Add this to your MCP client config, or use one-click install buttons:
{
"mcpServers": {
"pombase": {
"url": "https://gateway.pipeworx.io/pombase/mcp"
}
}
}See Getting Started for client-specific install steps.