@pipeworx/pombase
Connect: https://pipeworx.io/mcp — every tool in the catalog, including @pipeworx/pombase’s. Install: one-click buttons
Connect to just the @pipeworx/pombase pack
https://gateway.pipeworx.io/pombase/mcp — only @pipeworx/pombase’s own tools, nothing else in the catalog.
No MCP client? Skip the connection: POST https://gateway.pipeworx.io/v1/tools/search_packs {"query":"..."} to find a tool below, GET /v1/tools/<name> for its schema, POST the same URL with arguments for the data — see For AI agents.
Tools: 2
Tools
- get_gene — PomBase (fission yeast / S. pombe model-organism DB): look up a gene by its PomBase systematic id and return its product, protein domains (InterPro), deletion viability, UniProt id, and curation statu
- get_reference — PomBase: look up a curated S. pombe publication by its PubMed id (e.g. “PMID:11739790”) and return its title, citation, authors, year, abstract, and how many genes it annotates. Keyless.
Tools
get_gene— PomBase (fission yeast / S. pombe model-organism DB): look up a gene by its PomBase systematic id and return its product, protein domains (InterPro), deletion viability, UniProt id, and curation statuget_reference— PomBase: look up a curated S. pombe publication by its PubMed id (e.g. PMID:11739790 ) and return its title, citation, authors, year, abstract, and how many genes it annotates. Keyless.