mgnify_study

Pack: mgnify · Endpoint: https://gateway.pipeworx.io/mgnify/mcp

No MCP client? Call it directly: GET https://gateway.pipeworx.io/v1/tools/mgnify_study for the schema, then POST the same URL with its arguments for the data.

Fetch one MGnify metagenomics study in full by its accession (MGYS…) — title, controlled biome classification, the ENA project and study accessions behind it, available downloads and last-update date. Use after mgnify_search_studies, or when a paper cites an MGYS accession and you need to know what it actually is.

Parameters

Example call

Arguments

{
  "accession": "MGYS00010519"
}

curl

curl -X POST https://gateway.pipeworx.io/mgnify/mcp \
  -H 'Content-Type: application/json' \
  -d '{"jsonrpc":"2.0","id":1,"method":"tools/call","params":{"name":"mgnify_study","arguments":{"accession":"MGYS00010519"}}}'

TypeScript (@pipeworx/sdk)

import { Pipeworx } from '@pipeworx/sdk';
const pipeworx = new Pipeworx();

const result = await pipeworx.call('mgnify_study', {
  "accession": "MGYS00010519"
});

Connect

Add this to your MCP client config, or use one-click install buttons:

{
  "mcpServers": {
    "mgnify": {
      "url": "https://gateway.pipeworx.io/mgnify/mcp"
    }
  }
}

See Getting Started for client-specific install steps.