@pipeworx/gwas-catalog

Connect: https://gateway.pipeworx.io/gwas-catalog/mcp · Install: one-click buttons

Tools: 3

Tools

  • get_snp — GWAS Catalog: look up a single-nucleotide polymorphism (SNP) by rsID. Returns functional class, chromosome/region locations, and mapped genes (with up/downstream + distance). Keyless, from EBI/NHGRI.
  • snp_associations — GWAS Catalog: get trait/disease associations for a SNP (rsID) — risk allele, p-value, odds ratio per copy, beta/effect size, and risk allele frequency. Keyless, from EBI/NHGRI.
  • studies_by_trait — GWAS Catalog: find genome-wide association studies for a disease/trait (EFO trait, e.g. “asthma” or “type 2 diabetes”). Returns accession, PubMed ID, title, journal, date, sample size. Keyless, from E

Tools

  • get_snp — GWAS Catalog: look up a single-nucleotide polymorphism (SNP) by rsID. Returns functional class, chromosome/region locations, and mapped genes (with up/downstream + distance). Keyless, from EBI/NHGRI.
  • snp_associations — GWAS Catalog: get trait/disease associations for a SNP (rsID) — risk allele, p-value, odds ratio per copy, beta/effect size, and risk allele frequency. Keyless, from EBI/NHGRI.
  • studies_by_trait — GWAS Catalog: find genome-wide association studies for a disease/trait (EFO trait, e.g. asthma or type 2 diabetes ). Returns accession, PubMed ID, title, journal, date, sample size. Keyless, from EBI/

Regenerated from source · build June 9, 2026