@pipeworx/biostudies

Connect: https://pipeworx.io/mcp — every tool in the catalog, including @pipeworx/biostudies’s. Install: one-click buttons

Connect to just the @pipeworx/biostudies pack

https://gateway.pipeworx.io/biostudies/mcp — only @pipeworx/biostudies’s own tools, nothing else in the catalog.

No MCP client? Skip the connection: POST https://gateway.pipeworx.io/v1/tools/search_packs {"query":"..."} to find a tool below, GET /v1/tools/<name> for its schema, POST the same URL with arguments for the data — see For AI agents.

Tools: 2

Tools

  • search_studies — Search EBI BioStudies — a keyless database of biological study descriptions that links across EBI archives (ArrayExpress, PRIDE, etc.). Find studies by keyword and get accession, title, authors, type,
  • get_study — Get the metadata for a single EBI BioStudies study by accession (e.g. “S-EPMC6010251”). Returns the title, flattened attributes (abstract, release date, data source, etc.), and counts of links and sub

Tools

  • get_study — Get the metadata for a single EBI BioStudies study by accession (e.g. S-EPMC6010251 ). Returns the title, flattened attributes (abstract, release date, data source, etc.), and counts of links and subs
  • search_studies — Search EBI BioStudies — a keyless database of biological study descriptions that links across EBI archives (ArrayExpress, PRIDE, etc.). Find studies by keyword and get accession, title, authors, type,

Regenerated from source · build October 23, 2026