`annotations`

Pack: alphafold · Connect: https://pipeworx.io/mcp (see Connect below for a single-pack URL)

No MCP client? Call it directly: GET https://gateway.pipeworx.io/v1/tools/annotations for the schema, then POST the same URL with its arguments for the data.

Sequence-level annotations (e.g. MUTAGEN, LOW_CONFIDENCE_REGIONS).

Parameters

Name	Type	Required	Description
`qualifier`	string	yes
`type`	string	no	Annotation type filter (optional).

Example call

Arguments

{
  "qualifier": "P00533"
}

curl

curl -X POST https://gateway.pipeworx.io/alphafold/mcp \
  -H 'Content-Type: application/json' \
  -d '{"jsonrpc":"2.0","id":1,"method":"tools/call","params":{"name":"annotations","arguments":{"qualifier":"P00533"}}}'

TypeScript (@pipeworx/sdk)

import { Pipeworx } from '@pipeworx/sdk';
const pipeworx = new Pipeworx();

const result = await pipeworx.call('annotations', {
  "qualifier": "P00533"
});

More examples

{
  "qualifier": "P00533",
  "type": "LOW_CONFIDENCE_REGIONS"
}

Response shape

Field	Type	Description
`uniprotAccession`	string	UniProt accession code
`annotations`	array	List of sequence annotations

Full JSON Schema

{
  "type": "object",
  "description": "Sequence-level annotations for a protein",
  "properties": {
    "uniprotAccession": {
      "type": "string",
      "description": "UniProt accession code"
    },
    "annotations": {
      "type": "array",
      "description": "List of sequence annotations",
      "items": {
        "type": "object",
        "properties": {
          "type": {
            "type": "string",
            "description": "Annotation type"
          },
          "position": {
            "type": "integer",
            "description": "Position in sequence"
          },
          "description": {
            "type": "string",
            "description": "Annotation description"
          },
          "evidenceCode": {
            "type": "string",
            "description": "Evidence code"
          }
        }
      }
    }
  }
}

Connect

Add this to your MCP client config — every tool in the catalog, including this one — or use one-click install buttons:

{
  "mcpServers": {
    "pipeworx": {
      "url": "https://pipeworx.io/mcp"
    }
  }
}

Connect to just the alphafold pack

{
  "mcpServers": {
    "alphafold": {
      "url": "https://gateway.pipeworx.io/alphafold/mcp"
    }
  }
}

See Getting Started for client-specific install steps.

annotations